XML External Entities (XXE)

jsbml-core is vulnerable to XML External Entities XXE attacks. The vulnerability exists as external entities are not disabled by default in SBML files, allowing an attacker to load and retrieve system files such as /etc/passwd...

[SECURITY] Fedora 22 Update: COPASI-4.16-0.19.20150817git3bc4e9.fc22

COPASI is a software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs or Gillespie's stochastic simulation algorithm; arbitrary discrete events c...

[SECURITY] Fedora 23 Update: COPASI-4.16-0.19.20150817git3bc4e9.fc23

COPASI is a software application for simulation and analysis of biochemical networks and their dynamics. COPASI is a stand-alone program that supports models in the SBML standard and can simulate their behavior using ODEs or Gillespie's stochastic simulation algorithm; arbitrary discrete events c...

[SECURITY] Fedora 22 Update: libsedml-0.3.1-4.fc22

C++ library that fully supports SED-ML Simulation Experiment Description Markup Language for SBML as well as CellML models for creation of the description just as for the execution of Simulation Experiments. This project makes use of libSBML XML layer as well as code generation as starting point ...

[SECURITY] Fedora 23 Update: libsedml-0.3.1-4.fc23

C++ library that fully supports SED-ML Simulation Experiment Description Markup Language for SBML as well as CellML models for creation of the description just as for the execution of Simulation Experiments. This project makes use of libSBML XML layer as well as code generation as starting point ...