Open Babel has uninitialized pointer dereference in PQS pFormat

SummaryA memory-safety vulnerability in Open Babel's PQS parser caused anuninitialized pointer dereference when reading a crafted input file. DetailsThe flaw was in the pFormat handling of the PQS reader. A malformedinput caused the parser to dereference a format pointer that hadnever been...

PYSEC-2026-2779 Open Babel has out-of-bounds write in PQS coord_file parser

Summary A memory-safety vulnerability in Open Babel's PQS parser allowed an out-of-bounds write when reading a crafted input file. Details The flaw was in the coordfile parsing path of the PQS reader. A malformed coord file specifier caused the parser to write past the end of its destination...

Open Babel has out-of-bounds read in PQS lowerit (pre-buffer read)

SummaryA memory-safety vulnerability in Open Babel's PQS parser caused anout-of-bounds pre-buffer read when reading a crafted input file. DetailsThe flaw was in the lowerit helper used by the PQS parser. Amalformed input caused the helper to read one or more bytes beforethe start of its input...

PT-2026-59424

Summary A memory-safety vulnerability in Open Babel's PQS parser caused an out-of-bounds pre-buffer read when reading a crafted input file. Details The flaw was in the lowerit helper used by the PQS parser. A malformed input caused the helper to read one or more bytes before the start of its inpu...

PT-2026-59416

Summary A memory-safety vulnerability in Open Babel's PQS parser caused an uninitialized pointer dereference when reading a crafted input file. Details The flaw was in the pFormat handling of the PQS reader. A malformed input caused the parser to dereference a format pointer that had never been...

PT-2026-59418

Summary A memory-safety vulnerability in Open Babel's PQS parser allowed an out-of-bounds write when reading a crafted input file. Details The flaw was in the coord file parsing path of the PQS reader. A malformed coord file specifier caused the parser to write past the end of its destination...

GHSA-8QXC-57HF-HC9J Open Babel has uninitialized pointer dereference in PQS pFormat

Summary A memory-safety vulnerability in Open Babel's PQS parser caused an uninitialized pointer dereference when reading a crafted input file. Details The flaw was in the pFormat handling of the PQS reader. A malformed input caused the parser to dereference a format pointer that had never been...

Open Babel has uninitialized pointer dereference in PQS pFormat

Summary A memory-safety vulnerability in Open Babel's PQS parser caused an uninitialized pointer dereference when reading a crafted input file. Details The flaw was in the pFormat handling of the PQS reader. A malformed input caused the parser to dereference a format pointer that had never been...

Open Babel has out-of-bounds write in PQS coord_file parser

Summary A memory-safety vulnerability in Open Babel's PQS parser allowed an out-of-bounds write when reading a crafted input file. Details The flaw was in the coordfile parsing path of the PQS reader. A malformed coord file specifier caused the parser to write past the end of its destination...

PT-2026-55140

Summary A memory-safety vulnerability in Open Babel's PQS parser caused an out-of-bounds pre-buffer read when reading a crafted input file. Details The flaw was in the lowerit helper used by the PQS parser. A malformed input caused the helper to read one or more bytes before the start of its inpu...

PT-2026-55119

Summary A memory-safety vulnerability in Open Babel's PQS parser allowed an out-of-bounds write when reading a crafted input file. Details The flaw was in the coord file parsing path of the PQS reader. A malformed coord file specifier caused the parser to write past the end of its destination...

PT-2026-55110

Summary A memory-safety vulnerability in Open Babel's PQS parser caused an uninitialized pointer dereference when reading a crafted input file. Details The flaw was in the pFormat handling of the PQS reader. A malformed input caused the parser to dereference a format pointer that had never been...

SUSE CVE-2022-43467

An out-of-bounds write vulnerability exists in the PQS format coordfile functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability...

SUSE CVE-2022-46280

A use of uninitialized pointer vulnerability exists in the PQS format pFormat functionality of Open Babel 3.1.1 and master commit 530dbfa3. A specially crafted malformed file can lead to arbitrary code execution. An attacker can provide a malicious file to trigger this vulnerability...

EUVD-2023-49512

Malicious code in bioql PyPI...

EUVD-2023-42439

Malicious code in bioql PyPI...

Duplicate Advisory: Open Babel has out-of-bounds read in PQS lowerit (pre-buffer read)

Duplicate Advisory This advisory has been withdrawn because it is a duplicate of GHSA-m982-7q3h-r784. This link is maintained to preserve external references. Original Description A vulnerability was determined in Open Babel up to 3.1.1. This affects the function PQSFormat::ReadMolecule of the fi...

GHSA-7X26-54JJ-CVHR Duplicate Advisory: Open Babel has out-of-bounds read in PQS lowerit (pre-buffer read)

Duplicate Advisory This advisory has been withdrawn because it is a duplicate of GHSA-m982-7q3h-r784. This link is maintained to preserve external references. Original Description A vulnerability was determined in Open Babel up to 3.1.1. This affects the function PQSFormat::ReadMolecule of the fi...

CVE-2025-11000 Open Babel PQSformat.cpp ReadMolecule null pointer dereference

A vulnerability was determined in Open Babel up to 3.1.1. This affects the function PQSFormat::ReadMolecule of the file /src/formats/PQSformat.cpp. This manipulation causes null pointer dereference. The attack is restricted to local execution. The exploit has been publicly disclosed and may be...

CVE-2023-45205

A vulnerability has been identified in SICAM PAS/PQS All versions = V8.00 V8.20. The affected application is installed with specific files and folders with insecure permissions. This could allow an authenticated local attacker to inject arbitrary code and escalate privileges to NT AUTHORITY/SYSTE...