Malicious code in phenopacket-store-toolkit (PyPI)

Part of the "Hades" wave of the Shai-Hulud supply-chain campaign. On 2026-06-08,malicious phantom releases of phenopacket-store-toolkit were published to PyPI using stolencredentials. The package executes a bundled JavaScript payload via the Bunruntime on import that harvests and exfiltrates...

gpsea (>=0.2.0, <=0.9.11), ppkt2synergy (>=0.0.7, <=0.1.0) potentially affected by unknown CVE via phenopacket-store-toolkit (0.1.6)

phenopacket-store-toolkit PYPI version 0.1.6 is affected by a known vulnerability. The following packages have a transitive dependency on phenopacket-store-toolkit and may be impacted: - gpsea =0.2.0, =0.0.7, =0.1.0 Source cves: unknown CVE Source advisory:...

Embedded Malicious Code

Overview phenopacket-store-toolkit is a Python package and CLI for managing Phenopacket Store, a collection of GA4GH Phenopacket cohorts that represent individuals with Mendelian diseases. Affected versions of this package are vulnerable to Embedded Malicious Code. This package contains malicious...