CVE-2026-31967 HTSlib CRAM reader has out-of-bounds read due to improper validation of input

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the cramdecodeslice function called while reading CRAM records, the value of the mate reference id field was not validated. Later use of this value, fo...

CVE-2026-31967

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the cramdecodeslice function called while reading CRAM records, the value of the mate reference id field was not validated. Later use of this value, fo...

CVE-2026-31966

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. As one method of removing redundant data, CRAM uses reference-based compression so that instead of storing the full sequence for each alignment record it...

CVE-2026-31965 HTSlib CRAM reader has out-of-bounds reads due to improper validation of input

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the cramdecodeslice function called while reading CRAM records, validation of the reference id field occurred too late, allowing two out of bounds read...

CVE-2026-31965

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the cramdecodeslice function called while reading CRAM records, validation of the reference id field occurred too late, allowing two out of bounds read...

CVE-2026-31964 HTSlib CRAM decoder has a NULL Pointer Dereference

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data using a variety of encodings and compression methods. While most alignment records store DNA sequence and quality values, the format also allows them to om...

CVE-2026-31963

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. As one method of removing redundant data, CRAM uses reference-based compression so that instead of storing the full sequence for each alignment record it...

CVE-2026-31963 HTSlib CRAM reader has heap buffer overflow due to improper validation of input

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. As one method of removing redundant data, CRAM uses reference-based compression so that instead of storing the full sequence for each alignment record it...

DEBIAN-CVE-2026-31962

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. While most alignment records store DNA sequence and quality values, the format also allows them to omit this data in certain cases to save space. Due to...

EUVD-2026-12923

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. While most alignment records store DNA sequence and quality values, the format also allows them to omit this data in certain cases to save space. Due to...

GHSA-QPXP-75PX-XJCP pypdf has inefficient decoding of array-based streams

Impact An attacker who uses this vulnerability can craft a PDF which leads to long runtimes and/or large memory usage. This requires accessing an array-based stream with lots of entries. Patches This has been fixed in pypdf==6.9.1. Workarounds If you cannot upgrade yet, consider applying the...

pypdf has inefficient decoding of array-based streams

Impact An attacker who uses this vulnerability can craft a PDF which leads to long runtimes and/or large memory usage. This requires accessing an array-based stream with lots of entries. Patches This has been fixed in pypdf==6.9.1. Workarounds If you cannot upgrade yet, consider applying the...

CVE-2026-30922 pyasn1 Vulnerable to Denial of Service via Unbounded Recursion

pyasn1 is a generic ASN.1 library for Python. Prior to 0.6.3, the pyasn1 library is vulnerable to a Denial of Service DoS attack caused by uncontrolled recursion when decoding ASN.1 data with deeply nested structures. An attacker can supply a crafted payload containing thousands of nested SEQUENC...

SUSE CVE-2026-32775

libexif through 0.6.25 has a flaw in decoding MakerNotes. If the exifmnotedatagetvalue function gets passed in a 0 size, the passed in-buffer would be overwritten due to an integer underflow...

Linux Distros Unpatched Vulnerability : CVE-2026-31962

The Linux/Unix host has one or more packages installed that are impacted by a vulnerability without a vendor supplied patch available. - HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. While most...

Linux Distros Unpatched Vulnerability : CVE-2026-31965

The Linux/Unix host has one or more packages installed that are impacted by a vulnerability without a vendor supplied patch available. - HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the...

Linux Distros Unpatched Vulnerability : CVE-2026-31966

The Linux/Unix host has one or more packages installed that are impacted by a vulnerability without a vendor supplied patch available. - HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. As one method of...

HTSlib 缓冲区错误漏洞

HTSlib is a C-language library developed by samtools. Versions of HTSlib prior to 1.23.1, 1.22.2, and 1.21.1 contain a buffer error vulnerability. This vulnerability stems from a single-digit error during the decoding of CRAM features, which may lead to a heap buffer overflow...

Linux Distros Unpatched Vulnerability : CVE-2026-31969

The Linux/Unix host has one or more packages installed that are impacted by a vulnerability without a vendor supplied patch available. - HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data using a variety of...

Linux Distros Unpatched Vulnerability : CVE-2026-30922

The Linux/Unix host has one or more packages installed that are impacted by a vulnerability without a vendor supplied patch available. - pyasn1 is a generic ASN.1 library for Python. Prior to 0.6.3, the pyasn1 library is vulnerable to a Denial of Service DoS attack caused by uncontrolled recursio...